Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Planktomarina
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Planktomarina |
| Species | Planktomarina temperata |
| Strain | RCA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Norwegian fjord |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
759356 bp
Thymine Count
765055 bp
Guanine Count
886270 bp
Cytosine Count
877441 bp
Genome Length
3288122 bp
Protein-coding Genes
3150 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fructose-6-phosphate aldolase | RCA23_RS04685 | Not Available | Negative | 978182 - 978835 | 23246.2 |
| primosomal protein n' | RCA23_RS04690 | Not Available | Positive | 978925 - 981114 | 79130.7 |
| protein meaa | RCA23_RS04695 | Not Available | Negative | 981122 - 983095 | 71907.2 |
| 1-acyl-sn-glycerol-3-phosphate acyltransferase | RCA23_RS04700 | Not Available | Positive | 983235 - 984599 | 51385.1 |
| crotonyl-coa carboxylase/reductase | RCA23_RS04705 | Not Available | Positive | 984707 - 985993 | 47574.6 |
| aaa family atpase | RCA23_RS04710 | Not Available | Positive | 986084 - 987634 | 56822.2 |
| trimethylamine methyltransferase family protein | RCA23_RS04715 | Not Available | Negative | 987845 - 989347 | 53387.1 |
| mmcb family dna repair protein | RCA23_RS04720 | Not Available | Positive | 989431 - 989895 | 17596.1 |
| duf6324 family protein | RCA23_RS04725 | Not Available | Negative | 989908 - 990096 | 6564.76 |
| Trna-his | Not Available | Not Available | Positive | 990296 - 990372 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
