Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Planktomarina
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Planktomarina |
| Species | Planktomarina temperata |
| Strain | RCA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Norwegian fjord |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
759356 bp
Thymine Count
765055 bp
Guanine Count
886270 bp
Cytosine Count
877441 bp
Genome Length
3288122 bp
Protein-coding Genes
3150 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosyltransferase n-terminal domain-containing protein | RCA23_RS04585 | Not Available | Negative | 955373 - 956644 | 47198.0 |
| udp-n-acetylglucosamine 2-epimerase | RCA23_RS04590 | Not Available | Negative | 956628 - 957758 | 41053.1 |
| n-acetylneuraminate synthase family protein | RCA23_RS04595 | Not Available | Negative | 957815 - 958846 | 37744.0 |
| hypothetical protein | RCA23_RS04600 | Not Available | Negative | 958926 - 959828 | 34234.8 |
| dsba family protein | RCA23_RS04605 | Not Available | Positive | 960025 - 960732 | 25255.2 |
| choline-sulfatase | RCA23_RS04610 | Not Available | Positive | 960822 - 962327 | 56284.3 |
| uracil-xanthine permease family protein | RCA23_RS04615 | Not Available | Negative | 962403 - 963713 | 44181.5 |
| hypothetical protein | RCA23_RS04620 | Not Available | Positive | 964085 - 964585 | 18686.6 |
| membrane dipeptidase | RCA23_RS04625 | Not Available | Positive | 964683 - 965636 | 34788.6 |
| hypothetical protein | RCA23_RS04630 | Not Available | Positive | 965633 - 967285 | 61234.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
