Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Planktomarina
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Planktomarina |
| Species | Planktomarina temperata |
| Strain | RCA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Norwegian fjord |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
759356 bp
Thymine Count
765055 bp
Guanine Count
886270 bp
Cytosine Count
877441 bp
Genome Length
3288122 bp
Protein-coding Genes
3150 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphate abc transporter permease subunit pstc | RCA23_RS04485 | Not Available | Positive | 935385 - 936857 | 51425.4 |
| phosphate abc transporter permease psta | RCA23_RS04490 | Not Available | Positive | 936857 - 938185 | 47865.6 |
| phosphate abc transporter atp-binding protein pstb | RCA23_RS04495 | Not Available | Positive | 938199 - 938996 | 29294.2 |
| phosphate signaling complex protein phou | RCA23_RS04500 | Not Available | Positive | 939007 - 939699 | 25907.1 |
| phosphate regulon transcriptional regulator phob | RCA23_RS04505 | Not Available | Positive | 939724 - 940413 | 26106.7 |
| amidohydrolase | RCA23_RS04510 | Not Available | Positive | 940589 - 941791 | 42710.8 |
| urease accessory protein ured | RCA23_RS04515 | Not Available | Positive | 942220 - 942954 | 26564.4 |
| urease subunit gamma | RCA23_RS04520 | Not Available | Positive | 942958 - 943260 | 10974.4 |
| urease subunit beta | RCA23_RS04525 | Not Available | Positive | 943270 - 943575 | 11063.2 |
| urease subunit alpha | RCA23_RS04530 | Not Available | Positive | 943575 - 945314 | 62102.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
