Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Planktomarina
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Planktomarina |
| Species | Planktomarina temperata |
| Strain | RCA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Norwegian fjord |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
759356 bp
Thymine Count
765055 bp
Guanine Count
886270 bp
Cytosine Count
877441 bp
Genome Length
3288122 bp
Protein-coding Genes
3150 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| allantoate amidohydrolase | RCA23_RS04435 | Not Available | Positive | 923808 - 925058 | 45086.8 |
| dihydropyrimidinase | RCA23_RS04440 | Not Available | Positive | 925095 - 926549 | 52955.6 |
| abc transporter atp-binding protein | RCA23_RS04445 | Not Available | Positive | 926592 - 927374 | 28899.8 |
| abc transporter permease | RCA23_RS04450 | Not Available | Positive | 927402 - 928322 | 32594.2 |
| abc transporter permease | RCA23_RS04455 | Not Available | Positive | 928319 - 929161 | 30594.2 |
| abc transporter substrate-binding protein | RCA23_RS04460 | Not Available | Positive | 929210 - 930205 | 35300.9 |
| dmt family transporter | RCA23_RS04465 | Not Available | Negative | 930413 - 931297 | 32027.3 |
| dmt family transporter | RCA23_RS04470 | Not Available | Negative | 931913 - 932791 | 31915.8 |
| atp-binding protein | RCA23_RS04475 | Not Available | Positive | 933046 - 934104 | 38515.5 |
| substrate-binding domain-containing protein | RCA23_RS04480 | Not Available | Positive | 934233 - 935270 | 36173.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
