Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Planktomarina
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Planktomarina |
| Species | Planktomarina temperata |
| Strain | RCA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Norwegian fjord |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
759356 bp
Thymine Count
765055 bp
Guanine Count
886270 bp
Cytosine Count
877441 bp
Genome Length
3288122 bp
Protein-coding Genes
3150 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | RCA23_RS16340 | Not Available | Negative | 85875 - 86042 | 6361.48 |
| histidine phosphatase family protein | RCA23_RS00405 | Not Available | Positive | 86298 - 86852 | 20470.7 |
| tetratricopeptide repeat protein | RCA23_RS00410 | Not Available | Positive | 86971 - 87357 | 14543.0 |
| voc family protein | RCA23_RS00415 | Not Available | Negative | 87558 - 87971 | 15564.5 |
| hypothetical protein | RCA23_RS00425 | Not Available | Positive | 89246 - 89632 | 13997.7 |
| hypothetical protein | RCA23_RS15855 | Not Available | Positive | 89849 - 90679 | 30816.2 |
| giy-yig nuclease family protein | RCA23_RS00435 | Not Available | Negative | 91066 - 92517 | 55322.3 |
| recombinase family protein | RCA23_RS00440 | Not Available | Positive | 93431 - 93994 | 20478.1 |
| hypothetical protein | RCA23_RS00445 | Not Available | Positive | 94002 - 94223 | 8659.2 |
| hypothetical protein | RCA23_RS16345 | Not Available | Positive | 94400 - 95290 | 32618.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
