Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Planktomarina
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Planktomarina |
| Species | Planktomarina temperata |
| Strain | RCA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Norwegian fjord |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
759356 bp
Thymine Count
765055 bp
Guanine Count
886270 bp
Cytosine Count
877441 bp
Genome Length
3288122 bp
Protein-coding Genes
3150 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nucleoside 2-deoxyribosyltransferase | RCA23_RS04335 | Not Available | Positive | 904753 - 905184 | 15638.5 |
| duf3303 family protein | RCA23_RS04340 | Not Available | Negative | 905275 - 905532 | 9707.58 |
| hypothetical protein | RCA23_RS04345 | Not Available | Negative | 905572 - 905859 | 10722.9 |
| hypothetical protein | RCA23_RS04350 | Not Available | Negative | 905899 - 906228 | 11757.4 |
| hypothetical protein | RCA23_RS04355 | Not Available | Positive | 906661 - 906996 | 12614.1 |
| fad-dependent oxidoreductase | RCA23_RS04360 | Not Available | Negative | 907033 - 908403 | 47203.8 |
| oxaloacetate decarboxylase | RCA23_RS04365 | Not Available | Negative | 908387 - 909253 | 30797.8 |
| cysteine hydrolase family protein | RCA23_RS04370 | Not Available | Negative | 909250 - 909870 | 22238.7 |
| hydantoinase/oxoprolinase family protein | RCA23_RS04375 | Not Available | Negative | 909872 - 911929 | 73011.3 |
| hydantoinase b/oxoprolinase family protein | RCA23_RS04380 | Not Available | Negative | 911926 - 913620 | 60085.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
