Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Planktomarina
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Planktomarina |
| Species | Planktomarina temperata |
| Strain | RCA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Norwegian fjord |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
759356 bp
Thymine Count
765055 bp
Guanine Count
886270 bp
Cytosine Count
877441 bp
Genome Length
3288122 bp
Protein-coding Genes
3150 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fcd domain-containing protein | RCA23_RS04285 | Not Available | Positive | 895219 - 895896 | 24694.7 |
| aminomethyltransferase family protein | RCA23_RS04290 | Not Available | Positive | 895914 - 897314 | 52227.7 |
| trap transporter substrate-binding protein | RCA23_RS04295 | Not Available | Positive | 897391 - 898368 | 34067.3 |
| trap transporter small permease | RCA23_RS04300 | Not Available | Positive | 898371 - 898883 | 18221.9 |
| trap transporter large permease | RCA23_RS04305 | Not Available | Positive | 898880 - 900184 | 45348.5 |
| voc family protein | RCA23_RS04310 | Not Available | Positive | 900268 - 901209 | 35600.7 |
| mfs transporter | RCA23_RS04315 | Not Available | Positive | 901219 - 902451 | 43344.6 |
| c-type cytochrome | RCA23_RS04320 | Not Available | Positive | 902749 - 903183 | 15590.8 |
| copper resistance copc family protein | RCA23_RS04325 | Not Available | Positive | 903218 - 903562 | 12148.6 |
| copd family protein | RCA23_RS04330 | Not Available | Positive | 903559 - 904410 | 29599.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
