Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Planktomarina
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Planktomarina |
| Species | Planktomarina temperata |
| Strain | RCA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Norwegian fjord |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
759356 bp
Thymine Count
765055 bp
Guanine Count
886270 bp
Cytosine Count
877441 bp
Genome Length
3288122 bp
Protein-coding Genes
3150 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fad-dependent monooxygenase | RCA23_RS04190 | Not Available | Negative | 872701 - 874242 | 56265.9 |
| aldehyde dehydrogenase family protein | RCA23_RS04195 | Not Available | Negative | 874248 - 875672 | 50348.3 |
| amidohydrolase family protein | RCA23_RS04200 | Not Available | Negative | 875669 - 876685 | 38432.9 |
| iclr family transcriptional regulator | RCA23_RS04205 | Not Available | Negative | 876682 - 877470 | 28587.5 |
| trap transporter permease | RCA23_RS04210 | Not Available | Negative | 877467 - 879401 | 68073.6 |
| taxi family trap transporter solute-binding subunit | RCA23_RS04215 | Not Available | Negative | 879408 - 880358 | 33230.3 |
| thiamine pyrophosphate-requiring protein | RCA23_RS04220 | Not Available | Positive | 880496 - 882190 | 60627.1 |
| flotillin family protein | RCA23_RS04225 | Not Available | Negative | 882265 - 883788 | 55395.2 |
| coniferyl-alcohol dehydrogenase | RCA23_RS04230 | Not Available | Negative | 883800 - 884588 | 28962.8 |
| aldehyde dehydrogenase family protein | RCA23_RS04235 | Not Available | Negative | 884591 - 886066 | 52861.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
