Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Planktomarina
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Planktomarina |
| Species | Planktomarina temperata |
| Strain | RCA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Norwegian fjord |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
759356 bp
Thymine Count
765055 bp
Guanine Count
886270 bp
Cytosine Count
877441 bp
Genome Length
3288122 bp
Protein-coding Genes
3150 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| flagellar hook-associated protein flgl | RCA23_RS04040 | Not Available | Negative | 840275 - 841564 | 45730.8 |
| flagellar hook-associated protein flgk | RCA23_RS04045 | Not Available | Negative | 841581 - 845822 | 145326.0 |
| rod-binding protein | RCA23_RS04050 | Not Available | Negative | 845825 - 846175 | 12472.7 |
| flagellar basal body p-ring protein flgi | RCA23_RS04055 | Not Available | Negative | 846188 - 847324 | 38867.6 |
| flagellar basal body l-ring protein flgh | RCA23_RS04060 | Not Available | Negative | 847338 - 848021 | 24290.4 |
| flagellar basal-body rod protein flgg | RCA23_RS04065 | Not Available | Negative | 848032 - 848820 | 27528.5 |
| flagellar basal body rod c-terminal domain-containing protein | RCA23_RS04070 | Not Available | Negative | 848882 - 849601 | 25914.5 |
| flagellar hook-basal body complex protein | RCA23_RS04075 | Not Available | Negative | 849668 - 853429 | 133522.0 |
| flagellar hook capping flgd n-terminal domain-containing protein | RCA23_RS04080 | Not Available | Negative | 853497 - 854198 | 24565.6 |
| flagellar basal body rod protein flgc | RCA23_RS04085 | Not Available | Negative | 854214 - 854630 | 14992.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
