Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Planktomarina
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Planktomarina |
| Species | Planktomarina temperata |
| Strain | RCA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Norwegian fjord |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
759356 bp
Thymine Count
765055 bp
Guanine Count
886270 bp
Cytosine Count
877441 bp
Genome Length
3288122 bp
Protein-coding Genes
3150 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| flagellar type iii secretion system pore protein flip | RCA23_RS03935 | Not Available | Negative | 821713 - 822474 | 27307.3 |
| flagellar biosynthetic protein flio | RCA23_RS03940 | Not Available | Negative | 822467 - 822742 | 10004.5 |
| flagellar motor switch protein flin | RCA23_RS03945 | Not Available | Negative | 822874 - 823188 | 11553.9 |
| flagellar motor switch protein flim | RCA23_RS03950 | Not Available | Negative | 823201 - 824196 | 36640.1 |
| flagellar basal body-associated protein flil | RCA23_RS03955 | Not Available | Negative | 824208 - 824801 | 21225.1 |
| flagellar hook-length control protein flik | RCA23_RS03960 | Not Available | Negative | 824819 - 826771 | 69615.7 |
| hypothetical protein | RCA23_RS03965 | Not Available | Negative | 826829 - 827248 | 16413.8 |
| flii/yscn family atpase | RCA23_RS03970 | Not Available | Negative | 827250 - 828581 | 47167.0 |
| flih/sctl family protein | RCA23_RS15920 | Not Available | Negative | 828578 - 829597 | 36998.4 |
| flagellar motor switch protein flig | RCA23_RS03980 | Not Available | Negative | 829594 - 830634 | 37886.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
