Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Planktomarina
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Planktomarina |
| Species | Planktomarina temperata |
| Strain | RCA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Norwegian fjord |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
759356 bp
Thymine Count
765055 bp
Guanine Count
886270 bp
Cytosine Count
877441 bp
Genome Length
3288122 bp
Protein-coding Genes
3150 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | RCA23_RS16395 | Not Available | Negative | 804156 - 804494 | 12700.1 |
| duf3764 family protein | RCA23_RS03840 | Not Available | Negative | 804520 - 804828 | 11519.9 |
| hypothetical protein | RCA23_RS03845 | Not Available | Negative | 804861 - 805484 | 22114.4 |
| l,d-transpeptidase | RCA23_RS16730 | Not Available | Positive | 805781 - 806716 | 35127.8 |
| yjbh domain-containing protein | RCA23_RS03855 | Not Available | Negative | 806854 - 807561 | 28028.9 |
| peptide antibiotic transporter sbma | RCA23_RS03860 | Not Available | Negative | 807802 - 809049 | 47508.7 |
| hypothetical protein | RCA23_RS03865 | Not Available | Positive | 809116 - 809526 | 15680.4 |
| hypothetical protein | RCA23_RS03870 | Not Available | Positive | 809574 - 809837 | 9842.73 |
| is481 family transposase | RCA23_RS03875 | Not Available | Negative | 809865 - 810944 | 41026.2 |
| hggxstg domain-containing protein | RCA23_RS03880 | Not Available | Negative | 811252 - 811605 | 12893.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
