Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Planktomarina
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Planktomarina |
| Species | Planktomarina temperata |
| Strain | RCA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Norwegian fjord |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
759356 bp
Thymine Count
765055 bp
Guanine Count
886270 bp
Cytosine Count
877441 bp
Genome Length
3288122 bp
Protein-coding Genes
3150 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosyltransferase family 4 protein | RCA23_RS03705 | Not Available | Negative | 771961 - 773130 | 42670.7 |
| yjbh domain-containing protein | RCA23_RS16705 | Not Available | Negative | 773286 - 773504 | 8277.2 |
| glycosyltransferase | RCA23_RS03710 | Not Available | Positive | 774283 - 775224 | 33898.1 |
| hypothetical protein | RCA23_RS03720 | Not Available | Positive | 775844 - 776335 | 18627.4 |
| transposase | RCA23_RS16830 | Not Available | Negative | 776738 - 776989 | 9260.15 |
| transposase | RCA23_RS16710 | Not Available | Negative | 776907 - 777374 | 17276.2 |
| transposase | RCA23_RS16715 | Not Available | Negative | 777396 - 777803 | 15630.8 |
| hypothetical protein | RCA23_RS03735 | Not Available | Positive | 778001 - 778423 | 15860.7 |
| hypothetical protein | RCA23_RS03740 | Not Available | Positive | 778428 - 778958 | 19781.6 |
| is6 family transposase | RCA23_RS03745 | Not Available | Positive | 779627 - 780334 | 28298.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
