Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Planktomarina
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Planktomarina |
| Species | Planktomarina temperata |
| Strain | RCA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Norwegian fjord |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
759356 bp
Thymine Count
765055 bp
Guanine Count
886270 bp
Cytosine Count
877441 bp
Genome Length
3288122 bp
Protein-coding Genes
3150 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| degt/dnrj/eryc1/strs aminotransferase family protein | RCA23_RS03655 | Not Available | Negative | 764015 - 765109 | 39659.8 |
| wxcm-like domain-containing protein | RCA23_RS16645 | Not Available | Negative | 765106 - 765867 | 28123.0 |
| wxcm-like domain-containing protein | RCA23_RS03665 | Not Available | Negative | 765860 - 766099 | 8969.44 |
| gnat family n-acetyltransferase | RCA23_RS03670 | Not Available | Negative | 766103 - 766642 | 20514.8 |
| vi polysaccharide biosynthesis udp-n-acetylglucosamine c-6 dehydrogenase tvib | RCA23_RS03675 | Not Available | Negative | 766648 - 767913 | 45399.4 |
| class i sam-dependent methyltransferase | RCA23_RS03680 | Not Available | Negative | 767906 - 768637 | 27916.4 |
| nad-dependent epimerase/dehydratase family protein | RCA23_RS03685 | Not Available | Negative | 768634 - 769647 | 37899.4 |
| marr family eps-associated transcriptional regulator | RCA23_RS03690 | Not Available | Negative | 769713 - 770090 | 14430.6 |
| transcription termination/antitermination protein nusg | RCA23_RS03695 | Not Available | Positive | 770490 - 771002 | 19205.5 |
| elyc/sana/ydcf family protein | RCA23_RS03700 | Not Available | Negative | 771234 - 772016 | 28247.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
