Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Planktomarina
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Planktomarina |
| Species | Planktomarina temperata |
| Strain | RCA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Norwegian fjord |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
759356 bp
Thymine Count
765055 bp
Guanine Count
886270 bp
Cytosine Count
877441 bp
Genome Length
3288122 bp
Protein-coding Genes
3150 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| l-fuconate dehydratase | RCA23_RS03305 | Not Available | Negative | 688801 - 690078 | 46918.3 |
| fumarylacetoacetate hydrolase family protein | RCA23_RS03310 | Not Available | Negative | 690091 - 690933 | 29946.9 |
| sdr family oxidoreductase | RCA23_RS03315 | Not Available | Negative | 690977 - 691708 | 25368.6 |
| amidohydrolase family protein | RCA23_RS03320 | Not Available | Negative | 691701 - 692579 | 32140.4 |
| aldo/keto reductase | RCA23_RS03325 | Not Available | Negative | 692576 - 693475 | 31334.5 |
| abc transporter permease | RCA23_RS03330 | Not Available | Negative | 693475 - 694269 | 28526.8 |
| abc transporter permease | RCA23_RS03335 | Not Available | Negative | 694273 - 695094 | 30063.5 |
| hypothetical protein | RCA23_RS03340 | Not Available | Negative | 695091 - 695378 | 10375.5 |
| atp-binding cassette domain-containing protein | RCA23_RS03345 | Not Available | Negative | 695414 - 696202 | 29411.5 |
| abc transporter substrate-binding protein | RCA23_RS03350 | Not Available | Negative | 696214 - 697254 | 36457.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
