Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Planktomarina
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Planktomarina |
| Species | Planktomarina temperata |
| Strain | RCA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Norwegian fjord |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
759356 bp
Thymine Count
765055 bp
Guanine Count
886270 bp
Cytosine Count
877441 bp
Genome Length
3288122 bp
Protein-coding Genes
3150 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| serine hydrolase | RCA23_RS03255 | Not Available | Negative | 677702 - 679075 | 49780.6 |
| had family hydrolase | RCA23_RS03260 | Not Available | Negative | 679311 - 679979 | 24572.8 |
| atp-dependent clp protease adapter clps | RCA23_RS03265 | Not Available | Positive | 680103 - 680423 | 12123.7 |
| class i sam-dependent methyltransferase | RCA23_RS03270 | Not Available | Positive | 680427 - 681377 | 34095.8 |
| sdr family nad(p)-dependent oxidoreductase | RCA23_RS03275 | Not Available | Positive | 681417 - 682220 | 28390.8 |
| oxygen-dependent coproporphyrinogen oxidase | RCA23_RS03280 | Not Available | Positive | 682229 - 683110 | 32668.3 |
| ferric reductase-like transmembrane domain-containing protein | RCA23_RS03285 | Not Available | Positive | 683515 - 684843 | 48349.0 |
| fad-binding oxidoreductase | RCA23_RS03290 | Not Available | Negative | 684955 - 686376 | 51560.8 |
| Trna-met | Not Available | Not Available | Positive | 686465 - 686541 | Not Available |
| phage integrase sam-like domain-containing protein | RCA23_RS03300 | Not Available | Positive | 686706 - 688244 | 58188.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
