Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Planktomarina
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Planktomarina |
| Species | Planktomarina temperata |
| Strain | RCA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Norwegian fjord |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
759356 bp
Thymine Count
765055 bp
Guanine Count
886270 bp
Cytosine Count
877441 bp
Genome Length
3288122 bp
Protein-coding Genes
3150 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Ncrna_class:srp_rna | Not Available | Not Available | Positive | 667956 - 668054 | Not Available |
| nad(+) diphosphatase | RCA23_RS03210 | Not Available | Positive | 668143 - 669114 | 35580.5 |
| hypothetical protein | RCA23_RS03215 | Not Available | Positive | 669178 - 669648 | 17588.4 |
| prephenate dehydratase | RCA23_RS03220 | Not Available | Negative | 669645 - 670475 | 30114.1 |
| c-type cytochrome | RCA23_RS03225 | Not Available | Positive | 670595 - 671113 | 18273.5 |
| extracellular solute-binding protein | RCA23_RS03230 | Not Available | Positive | 671321 - 673186 | 69510.6 |
| microcin c abc transporter permease yejb | RCA23_RS03235 | Not Available | Positive | 673188 - 674267 | 39698.1 |
| abc transporter permease subunit | RCA23_RS03240 | Not Available | Positive | 674267 - 675379 | 41343.2 |
| abc transporter atp-binding protein | RCA23_RS03245 | Not Available | Positive | 675376 - 676956 | 57780.3 |
| fumarylacetoacetate hydrolase family protein | RCA23_RS03250 | Not Available | Negative | 676953 - 677633 | 24433.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
