Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Planktomarina
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Planktomarina |
| Species | Planktomarina temperata |
| Strain | RCA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Norwegian fjord |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
759356 bp
Thymine Count
765055 bp
Guanine Count
886270 bp
Cytosine Count
877441 bp
Genome Length
3288122 bp
Protein-coding Genes
3150 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phenylalanine--trna ligase subunit beta | RCA23_RS03165 | Not Available | Positive | 658701 - 661094 | 85749.4 |
| lrp/asnc family transcriptional regulator | RCA23_RS03170 | Not Available | Positive | 661282 - 661740 | 16866.5 |
| 30s ribosomal protein s21 | RCA23_RS03175 | Not Available | Negative | 661819 - 662019 | 7877.6 |
| coq9 family protein | RCA23_RS03180 | Not Available | Positive | 662122 - 662802 | 24884.9 |
| nad(p)h-quinone oxidoreductase | RCA23_RS03185 | Not Available | Positive | 662830 - 663807 | 34356.5 |
| cell cycle transcriptional regulator trcr | RCA23_RS03190 | Not Available | Positive | 663989 - 664744 | 27726.7 |
| hypothetical protein | RCA23_RS16385 | Not Available | Negative | 664755 - 664910 | 5344.66 |
| recombination mediator recr | RCA23_RS03195 | Not Available | Negative | 665044 - 665637 | 21484.1 |
| ybab/ebfc family nucleoid-associated protein | RCA23_RS03200 | Not Available | Negative | 665654 - 665998 | 11882.4 |
| dna polymerase iii subunit gamma/tau | RCA23_RS03205 | Not Available | Negative | 666067 - 667902 | 66134.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
