Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Planktomarina
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Planktomarina |
| Species | Planktomarina temperata |
| Strain | RCA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Norwegian fjord |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
759356 bp
Thymine Count
765055 bp
Guanine Count
886270 bp
Cytosine Count
877441 bp
Genome Length
3288122 bp
Protein-coding Genes
3150 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| n-formylglutamate amidohydrolase | RCA23_RS03115 | Not Available | Negative | 649542 - 650297 | 27616.9 |
| pyruvate kinase | RCA23_RS03120 | Not Available | Positive | 650384 - 651832 | 51653.1 |
| hypothetical protein | RCA23_RS03125 | Not Available | Positive | 651832 - 652062 | 7959.03 |
| 50s ribosomal protein l35 | RCA23_RS03130 | Not Available | Positive | 652176 - 652376 | 7417.3 |
| 50s ribosomal protein l20 | RCA23_RS03135 | Not Available | Positive | 652391 - 652753 | 13351.1 |
| s8 family serine peptidase | RCA23_RS03140 | Not Available | Positive | 652960 - 655311 | 82112.2 |
| hypothetical protein | RCA23_RS03145 | Not Available | Positive | 655323 - 655715 | 14283.2 |
| lysophospholipid acyltransferase family protein | RCA23_RS03150 | Not Available | Positive | 655882 - 656757 | 32608.6 |
| phenylalanine--trna ligase subunit alpha | RCA23_RS03155 | Not Available | Positive | 656869 - 657942 | 39918.6 |
| type 1 glutamine amidotransferase | RCA23_RS15905 | Not Available | Positive | 657976 - 658701 | 25962.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
