Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Planktomarina
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Planktomarina |
| Species | Planktomarina temperata |
| Strain | RCA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Norwegian fjord |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
759356 bp
Thymine Count
765055 bp
Guanine Count
886270 bp
Cytosine Count
877441 bp
Genome Length
3288122 bp
Protein-coding Genes
3150 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gephyrin-like molybdotransferase glp | RCA23_RS02970 | Not Available | Positive | 619674 - 620930 | 43316.3 |
| transcription elongation factor grea | RCA23_RS02975 | Not Available | Negative | 620965 - 621435 | 17140.5 |
| electron transfer flavoprotein-ubiquinone oxidoreductase | RCA23_RS02980 | Not Available | Positive | 621745 - 623397 | 59445.0 |
| tetratricopeptide repeat protein | RCA23_RS02985 | Not Available | Positive | 623502 - 625211 | 62033.8 |
| 4-(cytidine 5'-diphospho)-2-c-methyl-d-erythritol kinase | RCA23_RS02990 | Not Available | Positive | 625201 - 626028 | 28819.0 |
| polyprenyl synthetase family protein | RCA23_RS02995 | Not Available | Negative | 626045 - 627043 | 36118.1 |
| duf2007 domain-containing protein | RCA23_RS03000 | Not Available | Positive | 627102 - 627317 | 7955.7 |
| methyltransferase | RCA23_RS03005 | Not Available | Positive | 627317 - 628066 | 26694.1 |
| duf465 domain-containing protein | RCA23_RS16165 | Not Available | Positive | 628184 - 628360 | 6377.77 |
| acetoacetyl-coa reductase | RCA23_RS03010 | Not Available | Negative | 628439 - 629161 | 25158.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
