Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Planktomarina
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Planktomarina |
| Species | Planktomarina temperata |
| Strain | RCA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Norwegian fjord |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
759356 bp
Thymine Count
765055 bp
Guanine Count
886270 bp
Cytosine Count
877441 bp
Genome Length
3288122 bp
Protein-coding Genes
3150 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| yqge/algh family protein | RCA23_RS02920 | Not Available | Positive | 612351 - 612965 | 21327.8 |
| acyl-coa dehydrogenase | RCA23_RS02925 | Not Available | Positive | 613054 - 614754 | 59740.8 |
| mbl fold metallo-hydrolase | RCA23_RS02930 | Not Available | Positive | 614764 - 615792 | 38877.4 |
| aa3-type cytochrome c oxidase subunit iv | RCA23_RS02935 | Not Available | Positive | 615895 - 616035 | 5021.22 |
| hypothetical protein | RCA23_RS02940 | Not Available | Positive | 616040 - 616657 | 22227.5 |
| azld domain-containing protein | RCA23_RS02945 | Not Available | Negative | 616630 - 616959 | 11881.1 |
| azlc family abc transporter permease | RCA23_RS02950 | Not Available | Negative | 616956 - 617657 | 24768.6 |
| formate dehydrogenase accessory sulfurtransferase fdhd | RCA23_RS02955 | Not Available | Positive | 617712 - 618581 | 31752.5 |
| molybdenum cofactor guanylyltransferase moba | RCA23_RS02960 | Not Available | Positive | 618578 - 619183 | 21438.7 |
| molybdopterin-guanine dinucleotide biosynthesis protein b | RCA23_RS02965 | Not Available | Positive | 619180 - 619677 | 18111.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
