Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Planktomarina
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Planktomarina |
| Species | Planktomarina temperata |
| Strain | RCA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Norwegian fjord |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
759356 bp
Thymine Count
765055 bp
Guanine Count
886270 bp
Cytosine Count
877441 bp
Genome Length
3288122 bp
Protein-coding Genes
3150 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | RCA23_RS02870 | Not Available | Positive | 600046 - 600558 | 18499.5 |
| glutamate--cysteine ligase | RCA23_RS02875 | Not Available | Positive | 600631 - 602001 | 50485.2 |
| glycerol-3-phosphate 1-o-acyltransferase plsy | RCA23_RS02880 | Not Available | Negative | 602034 - 602642 | 21239.5 |
| dihydroorotase | RCA23_RS02885 | Not Available | Negative | 602639 - 603898 | 44962.9 |
| aspartate carbamoyltransferase catalytic subunit | RCA23_RS02890 | Not Available | Negative | 604040 - 604984 | 34764.2 |
| uracil-dna glycosylase | RCA23_RS02895 | Not Available | Positive | 605144 - 605956 | 28761.0 |
| molybdenum cofactor biosynthesis protein b | RCA23_RS02900 | Not Available | Positive | 605953 - 606495 | 19657.4 |
| hemolysin d | RCA23_RS02905 | Not Available | Positive | 606573 - 608030 | 51987.7 |
| efflux rnd transporter permease subunit | RCA23_RS02910 | Not Available | Positive | 608034 - 611426 | 121544.0 |
| protein-disulfide reductase dsbd domain-containing protein | RCA23_RS02915 | Not Available | Negative | 611423 - 612217 | 28684.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
