Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Planktomarina
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Planktomarina |
| Species | Planktomarina temperata |
| Strain | RCA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Norwegian fjord |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
759356 bp
Thymine Count
765055 bp
Guanine Count
886270 bp
Cytosine Count
877441 bp
Genome Length
3288122 bp
Protein-coding Genes
3150 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-trp | Not Available | Not Available | Positive | 579243 - 579318 | Not Available |
| surface lipoprotein assembly modifier | RCA23_RS02770 | Not Available | Negative | 579374 - 580699 | 49509.3 |
| m20 aminoacylase family protein | RCA23_RS02775 | Not Available | Negative | 580856 - 582022 | 41769.6 |
| dipeptide abc transporter atp-binding protein | RCA23_RS02780 | Not Available | Negative | 582037 - 583848 | 66495.9 |
| peptide abc transporter substrate-binding protein | RCA23_RS02785 | Not Available | Positive | 584120 - 585829 | 60878.3 |
| abc transporter permease | RCA23_RS02790 | Not Available | Positive | 585905 - 586912 | 37428.1 |
| abc transporter permease | RCA23_RS02795 | Not Available | Positive | 586905 - 587870 | 35311.6 |
| abc transporter atp-binding protein | RCA23_RS02800 | Not Available | Positive | 587971 - 588900 | 33374.8 |
| abc transporter permease | RCA23_RS02805 | Not Available | Positive | 588897 - 589658 | 27899.8 |
| s49 family peptidase | RCA23_RS02810 | Not Available | Positive | 589709 - 590494 | 28357.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
