Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Planktomarina
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Planktomarina |
| Species | Planktomarina temperata |
| Strain | RCA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Norwegian fjord |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
759356 bp
Thymine Count
765055 bp
Guanine Count
886270 bp
Cytosine Count
877441 bp
Genome Length
3288122 bp
Protein-coding Genes
3150 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| electron transfer flavoprotein subunit alpha/fixb family protein | RCA23_RS02715 | Not Available | Negative | 568622 - 569551 | 31376.0 |
| electron transfer flavoprotein subunit beta/fixa family protein | RCA23_RS02720 | Not Available | Negative | 569551 - 570309 | 26874.7 |
| cob(i)yrinic acid a,c-diamide adenosyltransferase | RCA23_RS02725 | Not Available | Negative | 570482 - 571054 | 20672.5 |
| twin transmembrane helix small protein | RCA23_RS02730 | Not Available | Negative | 571057 - 571257 | 7051.03 |
| sdr family nad(p)-dependent oxidoreductase | RCA23_RS02735 | Not Available | Negative | 571324 - 572154 | 30561.1 |
| dna topoisomerase iv subunit a | RCA23_RS02740 | Not Available | Positive | 572337 - 574667 | 86721.2 |
| duf898 family protein | RCA23_RS02745 | Not Available | Positive | 574762 - 576000 | 45548.4 |
| m48 family metallopeptidase | RCA23_RS02750 | Not Available | Positive | 575960 - 577117 | 41426.9 |
| hypothetical protein | RCA23_RS02755 | Not Available | Positive | 577191 - 577787 | 21735.1 |
| elongation factor tu | RCA23_RS02760 | Not Available | Positive | 577907 - 579082 | 42681.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
