Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Planktomarina
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Planktomarina |
| Species | Planktomarina temperata |
| Strain | RCA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Norwegian fjord |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
759356 bp
Thymine Count
765055 bp
Guanine Count
886270 bp
Cytosine Count
877441 bp
Genome Length
3288122 bp
Protein-coding Genes
3150 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| malonyl-coa decarboxylase | RCA23_RS02665 | Not Available | Negative | 558144 - 559391 | 46047.8 |
| acyl-coa dehydrogenase family protein | RCA23_RS02670 | Not Available | Negative | 559614 - 561272 | 60025.0 |
| sulfite exporter taue/safe family protein | RCA23_RS02675 | Not Available | Positive | 561381 - 562196 | 28621.9 |
| phosphoenolpyruvate carboxykinase | RCA23_RS02680 | Not Available | Negative | 562240 - 563841 | 58636.4 |
| response regulator transcription factor | RCA23_RS02685 | Not Available | Positive | 564119 - 564820 | 26459.1 |
| hamp domain-containing sensor histidine kinase | RCA23_RS02690 | Not Available | Positive | 564865 - 566508 | 58864.2 |
| hpr kinase/phosphorylase | RCA23_RS02695 | Not Available | Positive | 566513 - 566974 | 16158.4 |
| rnase adapter rapz | RCA23_RS02700 | Not Available | Positive | 566967 - 567878 | 33698.4 |
| pts sugar transporter subunit iia | RCA23_RS02705 | Not Available | Positive | 567875 - 568264 | 13412.3 |
| hpr family phosphocarrier protein | RCA23_RS02710 | Not Available | Positive | 568274 - 568540 | 9214.02 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
