Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Planktomarina
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Planktomarina |
| Species | Planktomarina temperata |
| Strain | RCA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Norwegian fjord |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
759356 bp
Thymine Count
765055 bp
Guanine Count
886270 bp
Cytosine Count
877441 bp
Genome Length
3288122 bp
Protein-coding Genes
3150 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dmt family transporter | RCA23_RS02560 | Not Available | Positive | 534844 - 535797 | 34325.9 |
| had family hydrolase | RCA23_RS02565 | Not Available | Positive | 535823 - 536443 | 23581.0 |
| nad(p)-binding domain-containing protein | RCA23_RS02570 | Not Available | Positive | 536440 - 537399 | 34062.8 |
| cobaltochelatase subunit cobn | RCA23_RS02575 | Not Available | Negative | 537361 - 541032 | 132319.0 |
| hypothetical protein | RCA23_RS16380 | Not Available | Positive | 541113 - 541280 | 5940.04 |
| gnat family n-acetyltransferase | RCA23_RS02585 | Not Available | Negative | 541283 - 541732 | 16080.2 |
| cobalamin biosynthesis protein cobw | RCA23_RS02590 | Not Available | Negative | 541736 - 542827 | 39205.3 |
| duf1636 family protein | RCA23_RS02595 | Not Available | Positive | 542908 - 543240 | 11619.0 |
| cbta family protein | RCA23_RS02600 | Not Available | Negative | 543248 - 543928 | 23485.9 |
| cbtb domain-containing protein | RCA23_RS02605 | Not Available | Negative | 543938 - 544075 | 4635.65 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
