Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Planktomarina
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Planktomarina |
| Species | Planktomarina temperata |
| Strain | RCA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Norwegian fjord |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
759356 bp
Thymine Count
765055 bp
Guanine Count
886270 bp
Cytosine Count
877441 bp
Genome Length
3288122 bp
Protein-coding Genes
3150 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| threonine/serine dehydratase | RCA23_RS02360 | Not Available | Negative | 494482 - 495411 | 32020.6 |
| 23s rrna (adenine(2503)-c(2))-methyltransferase rlmn | RCA23_RS02365 | Not Available | Negative | 495427 - 496617 | 43606.5 |
| invasion associated locus b family protein | RCA23_RS02370 | Not Available | Negative | 496688 - 497212 | 18582.2 |
| asparaginase | RCA23_RS02375 | Not Available | Positive | 497375 - 498349 | 34263.1 |
| phosphoserine phosphatase serb | RCA23_RS02380 | Not Available | Negative | 498410 - 499288 | 31482.8 |
| hypothetical protein | RCA23_RS02385 | Not Available | Positive | 499405 - 499902 | 18059.8 |
| phosphoserine transaminase | RCA23_RS02390 | Not Available | Positive | 500109 - 501251 | 41002.8 |
| phosphoglycerate dehydrogenase | RCA23_RS02395 | Not Available | Positive | 501306 - 502901 | 56064.8 |
| metallophosphoesterase family protein | RCA23_RS02400 | Not Available | Positive | 502898 - 503629 | 27339.4 |
| rna pyrophosphohydrolase | RCA23_RS02405 | Not Available | Negative | 503641 - 504126 | 18402.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
