Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Planktomarina
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Planktomarina |
| Species | Planktomarina temperata |
| Strain | RCA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Norwegian fjord |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
759356 bp
Thymine Count
765055 bp
Guanine Count
886270 bp
Cytosine Count
877441 bp
Genome Length
3288122 bp
Protein-coding Genes
3150 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 1-deoxy-d-xylulose-5-phosphate synthase | RCA23_RS02260 | Not Available | Positive | 475173 - 477101 | 68281.4 |
| sdr family oxidoreductase | RCA23_RS02265 | Not Available | Negative | 477105 - 477956 | 30582.7 |
| hypothetical protein | RCA23_RS02270 | Not Available | Positive | 478232 - 478657 | 14867.3 |
| hypothetical protein | RCA23_RS02275 | Not Available | Positive | 478753 - 479079 | 11580.0 |
| carnitinyl-coa dehydratase | RCA23_RS02280 | Not Available | Negative | 479142 - 479921 | 28023.5 |
| acetate--coa ligase family protein | RCA23_RS02285 | Not Available | Negative | 479918 - 481945 | 70353.9 |
| acyl-coa dehydrogenase family protein | RCA23_RS02290 | Not Available | Negative | 481997 - 483157 | 42979.3 |
| glxa family transcriptional regulator | RCA23_RS02295 | Not Available | Positive | 483234 - 484166 | 34215.1 |
| class ii aldolase and adducin n-terminal domain-containing protein | RCA23_RS02300 | Not Available | Negative | 484196 - 484951 | 28131.4 |
| arsenate reductase (glutaredoxin) | RCA23_RS02305 | Not Available | Negative | 485014 - 485442 | 15164.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
