Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Planktomarina
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Planktomarina |
| Species | Planktomarina temperata |
| Strain | RCA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Norwegian fjord |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
759356 bp
Thymine Count
765055 bp
Guanine Count
886270 bp
Cytosine Count
877441 bp
Genome Length
3288122 bp
Protein-coding Genes
3150 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | RCA23_RS02010 | Not Available | Positive | 422204 - 422473 | 9689.16 |
| atp-binding protein | RCA23_RS02015 | Not Available | Positive | 422474 - 425128 | 95107.8 |
| tigr01244 family sulfur transferase | RCA23_RS02020 | Not Available | Negative | 425109 - 425546 | 15831.6 |
| hypothetical protein | RCA23_RS02025 | Not Available | Negative | 425593 - 425805 | 7641.96 |
| duf2312 domain-containing protein | RCA23_RS02030 | Not Available | Positive | 425917 - 426168 | 9795.79 |
| hypothetical protein | RCA23_RS02035 | Not Available | Negative | 426184 - 427065 | 32649.1 |
| iron abc transporter permease | RCA23_RS02040 | Not Available | Positive | 427159 - 428790 | 57944.9 |
| Trna-thr | Not Available | Not Available | Positive | 428833 - 428908 | Not Available |
| duf6538 domain-containing protein | RCA23_RS02050 | Not Available | Positive | 428970 - 430124 | 43097.8 |
| hemerythrin domain-containing protein | RCA23_RS02055 | Not Available | Positive | 430197 - 430778 | 21587.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
