Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Planktomarina
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Planktomarina |
| Species | Planktomarina temperata |
| Strain | RCA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Norwegian fjord |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
759356 bp
Thymine Count
765055 bp
Guanine Count
886270 bp
Cytosine Count
877441 bp
Genome Length
3288122 bp
Protein-coding Genes
3150 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter atp-binding protein | RCA23_RS01860 | Not Available | Negative | 390600 - 391589 | 35807.5 |
| abc transporter permease | RCA23_RS01865 | Not Available | Negative | 391586 - 392467 | 31679.4 |
| abc transporter permease | RCA23_RS01870 | Not Available | Negative | 392464 - 393441 | 35218.9 |
| abc transporter substrate-binding protein | RCA23_RS01875 | Not Available | Negative | 393502 - 395073 | 57207.0 |
| lysr substrate-binding domain-containing protein | RCA23_RS01880 | Not Available | Negative | 395302 - 396231 | 33859.5 |
| amidohydrolase family protein | RCA23_RS01885 | Not Available | Positive | 396339 - 397982 | 59658.5 |
| gtp-binding protein | RCA23_RS01890 | Not Available | Positive | 397934 - 398881 | 32904.6 |
| restriction endonuclease | RCA23_RS01895 | Not Available | Positive | 399022 - 400035 | 37221.4 |
| betaine/proline/choline family abc transporter atp-binding protein | RCA23_RS01900 | Not Available | Negative | 400095 - 401150 | 38795.0 |
| proline/glycine betaine abc transporter permease | RCA23_RS01905 | Not Available | Negative | 401162 - 402193 | 37364.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
