Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Planktomarina
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Planktomarina |
| Species | Planktomarina temperata |
| Strain | RCA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Norwegian fjord |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
759356 bp
Thymine Count
765055 bp
Guanine Count
886270 bp
Cytosine Count
877441 bp
Genome Length
3288122 bp
Protein-coding Genes
3150 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acetyl-coa carboxylase, carboxyltransferase subunit beta | RCA23_RS01665 | Not Available | Negative | 354789 - 355709 | 33952.5 |
| type ii caax prenyl endopeptidase rce1 family protein | RCA23_RS01670 | Not Available | Negative | 355773 - 356654 | 32387.3 |
| dihydroxy-acid dehydratase | RCA23_RS01675 | Not Available | Positive | 356791 - 358524 | 60831.7 |
| hypothetical protein | RCA23_RS01680 | Not Available | Positive | 358660 - 359103 | 15628.6 |
| duf6478 family protein | RCA23_RS01685 | Not Available | Positive | 359279 - 360058 | 29571.4 |
| hypothetical protein | RCA23_RS01690 | Not Available | Positive | 360076 - 360423 | 12358.0 |
| ompa family protein | RCA23_RS01695 | Not Available | Negative | 360426 - 361331 | 32447.7 |
| peroxidase-related enzyme | RCA23_RS01700 | Not Available | Negative | 361339 - 361905 | 20761.8 |
| gnat family n-acetyltransferase | RCA23_RS01705 | Not Available | Negative | 361902 - 362627 | 26721.1 |
| competence/damage-inducible protein a | RCA23_RS01710 | Not Available | Negative | 362624 - 363346 | 25263.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
