Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Planktomarina
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Planktomarina |
| Species | Planktomarina temperata |
| Strain | RCA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Norwegian fjord |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
759356 bp
Thymine Count
765055 bp
Guanine Count
886270 bp
Cytosine Count
877441 bp
Genome Length
3288122 bp
Protein-coding Genes
3150 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | RCA23_RS16370 | Not Available | Negative | 345656 - 345805 | 5439.42 |
| Trna-thr | Not Available | Not Available | Positive | 345943 - 346017 | Not Available |
| atp-binding protein | RCA23_RS15885 | Not Available | Positive | 346329 - 347666 | 48323.6 |
| isopenicillin n synthase family oxygenase | RCA23_RS01630 | Not Available | Positive | 347759 - 348817 | 40284.0 |
| lyse family translocator | RCA23_RS01635 | Not Available | Positive | 348821 - 349465 | 22719.6 |
| srpbcc family protein | RCA23_RS01640 | Not Available | Positive | 349742 - 350194 | 15542.6 |
| xdhc family protein | RCA23_RS01645 | Not Available | Positive | 350184 - 351113 | 32724.6 |
| mfs transporter | RCA23_RS01650 | Not Available | Negative | 351108 - 352364 | 44423.4 |
| cell division protein zape | RCA23_RS01655 | Not Available | Positive | 352457 - 353512 | 38438.4 |
| bifunctional folylpolyglutamate synthase/dihydrofolate synthase | RCA23_RS01660 | Not Available | Negative | 353509 - 354792 | 45802.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
