Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Planktomarina
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Planktomarina |
| Species | Planktomarina temperata |
| Strain | RCA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Norwegian fjord |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
759356 bp
Thymine Count
765055 bp
Guanine Count
886270 bp
Cytosine Count
877441 bp
Genome Length
3288122 bp
Protein-coding Genes
3150 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-phe | Not Available | Not Available | Positive | 339207 - 339281 | Not Available |
| dna gyrase inhibitor yacg | RCA23_RS01575 | Not Available | Negative | 339438 - 339611 | 6266.26 |
| ribonuclease e/g | RCA23_RS01580 | Not Available | Negative | 339608 - 340630 | 36388.1 |
| nucleoside triphosphate pyrophosphatase | RCA23_RS01585 | Not Available | Negative | 340627 - 341241 | 22003.8 |
| translation initiation factor if-1 | RCA23_RS01590 | Not Available | Negative | 341201 - 341419 | 8234.17 |
| arsc family transcriptional regulator | RCA23_RS01595 | Not Available | Negative | 341622 - 342080 | 17062.4 |
| upf0262 family protein | RCA23_RS01600 | Not Available | Negative | 342086 - 342565 | 18055.4 |
| histidinol dehydrogenase | RCA23_RS01605 | Not Available | Negative | 342565 - 343866 | 45966.8 |
| duf2948 family protein | RCA23_RS01610 | Not Available | Negative | 343932 - 344390 | 16807.9 |
| udp-n-acetylglucosamine 1-carboxyvinyltransferase | RCA23_RS01615 | Not Available | Negative | 344387 - 345655 | 44413.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
