Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Planktomarina
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Planktomarina |
| Species | Planktomarina temperata |
| Strain | RCA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Norwegian fjord |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
759356 bp
Thymine Count
765055 bp
Guanine Count
886270 bp
Cytosine Count
877441 bp
Genome Length
3288122 bp
Protein-coding Genes
3150 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acyltransferase family protein | RCA23_RS15785 | Not Available | Positive | 3276115 - 3277296 | 44037.3 |
| nuclear transport factor 2 family protein | RCA23_RS15790 | Not Available | Negative | 3277550 - 3278383 | 30755.2 |
| winged helix-turn-helix transcriptional regulator | RCA23_RS15795 | Not Available | Positive | 3278502 - 3278876 | 14161.4 |
| sdr family nad(p)-dependent oxidoreductase | RCA23_RS15800 | Not Available | Positive | 3278997 - 3280049 | 39244.9 |
| duf2793 domain-containing protein | RCA23_RS15805 | Not Available | Negative | 3280023 - 3281732 | 60346.0 |
| phosphoglucosamine mutase | RCA23_RS15810 | Not Available | Negative | 3281858 - 3283201 | 47182.5 |
| 2-polyprenylphenol 6-hydroxylase | RCA23_RS15815 | Not Available | Negative | 3283315 - 3284844 | 56327.5 |
| bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase ubie | RCA23_RS15820 | Not Available | Negative | 3284845 - 3285597 | 27886.3 |
| bifunctional dna-formamidopyrimidine glycosylase/dna-(apurinic or apyrimidinic site) lyase | RCA23_RS15825 | Not Available | Positive | 3285680 - 3286531 | 31951.5 |
| enoyl-coa hydratase | RCA23_RS15830 | Not Available | Positive | 3286594 - 3287370 | 27899.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
