Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Planktomarina
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Planktomarina |
| Species | Planktomarina temperata |
| Strain | RCA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Norwegian fjord |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
759356 bp
Thymine Count
765055 bp
Guanine Count
886270 bp
Cytosine Count
877441 bp
Genome Length
3288122 bp
Protein-coding Genes
3150 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf2256 domain-containing protein | RCA23_RS16155 | Not Available | Positive | 329158 - 329334 | 6864.47 |
| nadp-dependent isocitrate dehydrogenase | RCA23_RS01520 | Not Available | Negative | 329382 - 331571 | 78304.6 |
| dmt family transporter | RCA23_RS01525 | Not Available | Negative | 331688 - 332596 | 32496.6 |
| c-type cytochrome | RCA23_RS01530 | Not Available | Positive | 332890 - 333540 | 23158.5 |
| fcsd flavin-binding domain-containing protein | RCA23_RS01535 | Not Available | Positive | 333567 - 334832 | 43846.1 |
| osmc family protein | RCA23_RS01540 | Not Available | Negative | 334916 - 335365 | 16548.5 |
| glycine cleavage t c-terminal barrel domain-containing protein | RCA23_RS01545 | Not Available | Negative | 335440 - 336582 | 41852.2 |
| lrp/asnc family transcriptional regulator | RCA23_RS01550 | Not Available | Negative | 336746 - 337231 | 18117.2 |
| amidase family protein | RCA23_RS01560 | Not Available | Positive | 337822 - 338094 | 9972.78 |
| glutathione s-transferase n-terminal domain-containing protein | RCA23_RS01565 | Not Available | Positive | 338152 - 338784 | 24475.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
