Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Planktomarina
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Planktomarina |
| Species | Planktomarina temperata |
| Strain | RCA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Norwegian fjord |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
759356 bp
Thymine Count
765055 bp
Guanine Count
886270 bp
Cytosine Count
877441 bp
Genome Length
3288122 bp
Protein-coding Genes
3150 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sensor histidine kinase regb | RCA23_RS15440 | Not Available | Positive | 3200649 - 3202016 | 50026.9 |
| pas domain-containing protein | RCA23_RS16135 | Not Available | Positive | 3202073 - 3203299 | 45595.8 |
| aminoglycoside phosphotransferase family protein | RCA23_RS15450 | Not Available | Positive | 3203450 - 3204445 | 37011.1 |
| nucleotidyltransferase family protein | RCA23_RS15455 | Not Available | Positive | 3204445 - 3205107 | 23737.6 |
| double-strand break repair protein addb | RCA23_RS15460 | Not Available | Positive | 3205100 - 3208018 | 108771.0 |
| double-strand break repair helicase adda | RCA23_RS15465 | Not Available | Positive | 3208015 - 3211371 | 122912.0 |
| thioredoxin | RCA23_RS15470 | Not Available | Positive | 3211430 - 3211750 | 11148.4 |
| atp-dependent protease subunit hslv | RCA23_RS15475 | Not Available | Positive | 3211858 - 3212415 | 19376.3 |
| atp-dependent protease atpase subunit hslu | RCA23_RS15480 | Not Available | Positive | 3212412 - 3213719 | 48125.6 |
| mfs transporter | RCA23_RS15485 | Not Available | Positive | 3213757 - 3214968 | 43524.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
