Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Planktomarina
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Planktomarina |
| Species | Planktomarina temperata |
| Strain | RCA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Norwegian fjord |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
759356 bp
Thymine Count
765055 bp
Guanine Count
886270 bp
Cytosine Count
877441 bp
Genome Length
3288122 bp
Protein-coding Genes
3150 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| yeee/yede family protein | RCA23_RS15290 | Not Available | Positive | 3170977 - 3171402 | 15122.8 |
| mbl fold metallo-hydrolase | RCA23_RS15295 | Not Available | Positive | 3171440 - 3172324 | 32134.0 |
| tigr01244 family sulfur transferase | RCA23_RS15300 | Not Available | Positive | 3172386 - 3172811 | 15114.1 |
| sulp family inorganic anion transporter | RCA23_RS15305 | Not Available | Positive | 3172854 - 3174578 | 61368.9 |
| amidase family protein | RCA23_RS15310 | Not Available | Positive | 3174632 - 3176065 | 50407.3 |
| hypothetical protein | RCA23_RS15315 | Not Available | Positive | 3176200 - 3176790 | 22542.1 |
| hypothetical protein | RCA23_RS15320 | Not Available | Positive | 3176778 - 3177194 | 15366.4 |
| ompa family protein | RCA23_RS15325 | Not Available | Positive | 3177342 - 3178808 | 53073.3 |
| molecular chaperone dnaj | RCA23_RS15330 | Not Available | Negative | 3178849 - 3179997 | 40585.7 |
| molecular chaperone dnak | RCA23_RS15335 | Not Available | Negative | 3180073 - 3181980 | 68296.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
