Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Planktomarina
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Planktomarina |
| Species | Planktomarina temperata |
| Strain | RCA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Norwegian fjord |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
759356 bp
Thymine Count
765055 bp
Guanine Count
886270 bp
Cytosine Count
877441 bp
Genome Length
3288122 bp
Protein-coding Genes
3150 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gfo/idh/moca family oxidoreductase | RCA23_RS01470 | Not Available | Positive | 319808 - 320809 | 36551.5 |
| gfo/idh/moca family protein | RCA23_RS01475 | Not Available | Positive | 320806 - 321861 | 37968.0 |
| mannonate dehydratase | RCA23_RS01480 | Not Available | Positive | 321858 - 323057 | 43719.1 |
| class i adenylate-forming enzyme family protein | RCA23_RS01485 | Not Available | Positive | 323103 - 324641 | 55636.1 |
| 3-hydroxybutyrate dehydrogenase | RCA23_RS01490 | Not Available | Positive | 324634 - 325440 | 27918.3 |
| heavy metal translocating p-type atpase | RCA23_RS01495 | Not Available | Positive | 325531 - 327783 | 78811.3 |
| cu(i)-responsive transcriptional regulator | RCA23_RS01500 | Not Available | Positive | 327811 - 328200 | 14513.4 |
| hypothetical protein | RCA23_RS01505 | Not Available | Negative | 328253 - 328492 | 8974.63 |
| hypothetical protein | RCA23_RS01510 | Not Available | Negative | 328534 - 328734 | 7445.05 |
| duf2805 domain-containing protein | RCA23_RS16690 | Not Available | Positive | 328997 - 329161 | 6396.78 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
