Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Planktomarina
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Planktomarina |
| Species | Planktomarina temperata |
| Strain | RCA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Norwegian fjord |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
759356 bp
Thymine Count
765055 bp
Guanine Count
886270 bp
Cytosine Count
877441 bp
Genome Length
3288122 bp
Protein-coding Genes
3150 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cobaltochelatase subunit cobn | RCA23_RS15240 | Not Available | Negative | 3158638 - 3162183 | 128113.0 |
| ferredoxin:protochlorophyllide reductase (atp-dependent) subunit b | RCA23_RS15245 | Not Available | Negative | 3162173 - 3163717 | 56814.8 |
| ferredoxin:protochlorophyllide reductase (atp-dependent) subunit n | RCA23_RS15250 | Not Available | Negative | 3163714 - 3164985 | 46064.6 |
| 2-vinyl bacteriochlorophyllide hydratase | RCA23_RS15255 | Not Available | Negative | 3164994 - 3165482 | 18215.7 |
| hypothetical protein | RCA23_RS15260 | Not Available | Positive | 3165737 - 3166510 | 27379.7 |
| transcriptional regulator ppsr | RCA23_RS15265 | Not Available | Positive | 3166592 - 3167995 | 51515.5 |
| cobalamin-dependent protein | RCA23_RS16125 | Not Available | Negative | 3168005 - 3168841 | 30133.9 |
| response regulator transcription factor | RCA23_RS15275 | Not Available | Negative | 3169207 - 3169806 | 21975.6 |
| tryptophan-rich sensory protein tspo | RCA23_RS15280 | Not Available | Negative | 3169872 - 3170351 | 17448.5 |
| yeee/yede family protein | RCA23_RS15285 | Not Available | Positive | 3170538 - 3170972 | 14646.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
