Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Planktomarina
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Planktomarina |
| Species | Planktomarina temperata |
| Strain | RCA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Norwegian fjord |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
759356 bp
Thymine Count
765055 bp
Guanine Count
886270 bp
Cytosine Count
877441 bp
Genome Length
3288122 bp
Protein-coding Genes
3150 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 5-aminolevulinate synthase | RCA23_RS15190 | Not Available | Negative | 3150210 - 3151424 | 44122.8 |
| putative photosynthetic complex assembly protein puhe | RCA23_RS15195 | Not Available | Negative | 3151414 - 3152220 | 29049.3 |
| magnesium-protoporphyrin ix monomethyl ester (oxidative) cyclase | RCA23_RS15200 | Not Available | Negative | 3152220 - 3153347 | 43229.5 |
| hypothetical protein | RCA23_RS15205 | Not Available | Negative | 3153344 - 3153640 | 10947.0 |
| photosynthetic complex assembly protein puhc | RCA23_RS15210 | Not Available | Negative | 3153657 - 3154124 | 16997.5 |
| photosynthetic complex putative assembly protein puhb | RCA23_RS15215 | Not Available | Negative | 3154130 - 3154768 | 23433.6 |
| photosynthetic reaction center subunit h | RCA23_RS15220 | Not Available | Negative | 3154827 - 3155600 | 28112.2 |
| pucc family protein | RCA23_RS15225 | Not Available | Negative | 3155619 - 3157046 | 49932.5 |
| magnesium protoporphyrin ix methyltransferase | RCA23_RS15230 | Not Available | Negative | 3157043 - 3157708 | 24333.5 |
| ferredoxin:protochlorophyllide reductase (atp-dependent) iron-sulfur atp-binding protein | RCA23_RS15235 | Not Available | Negative | 3157708 - 3158604 | 32464.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
