Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Planktomarina
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Planktomarina |
| Species | Planktomarina temperata |
| Strain | RCA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Norwegian fjord |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
759356 bp
Thymine Count
765055 bp
Guanine Count
886270 bp
Cytosine Count
877441 bp
Genome Length
3288122 bp
Protein-coding Genes
3150 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methyltransferase | RCA23_RS15090 | Not Available | Positive | 3131511 - 3132656 | 41304.1 |
| chlorophyll synthesis pathway protein bchc | RCA23_RS15095 | Not Available | Positive | 3132744 - 3133685 | 33027.4 |
| chlorophyllide a reductase iron protein subunit x | RCA23_RS15100 | Not Available | Positive | 3133682 - 3134686 | 35571.6 |
| chlorophyllide a reductase subunit y | RCA23_RS15105 | Not Available | Positive | 3134676 - 3136250 | 55183.6 |
| chlorophyllide a reductase subunit z | RCA23_RS15110 | Not Available | Positive | 3136250 - 3137710 | 53101.0 |
| cytochrome pufq | RCA23_RS15115 | Not Available | Positive | 3137707 - 3137940 | 8854.93 |
| light-harvesting antenna lh1, beta subunit | RCA23_RS15120 | Not Available | Positive | 3138087 - 3138242 | 5791.01 |
| light-harvesting antenna lh1, alpha subunit | RCA23_RS15125 | Not Available | Positive | 3138259 - 3138411 | 5750.18 |
| photosynthetic reaction center subunit l | RCA23_RS15130 | Not Available | Positive | 3138531 - 3139361 | 30590.3 |
| photosynthetic reaction center subunit m | RCA23_RS15135 | Not Available | Positive | 3139375 - 3140298 | 34493.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
