Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Planktomarina
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Planktomarina |
| Species | Planktomarina temperata |
| Strain | RCA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Norwegian fjord |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
759356 bp
Thymine Count
765055 bp
Guanine Count
886270 bp
Cytosine Count
877441 bp
Genome Length
3288122 bp
Protein-coding Genes
3150 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| arsr/smtb family transcription factor | RCA23_RS15040 | Not Available | Negative | 3120736 - 3121065 | 12329.1 |
| alpha/beta fold hydrolase bcho | RCA23_RS15045 | Not Available | Negative | 3121183 - 3122055 | 31411.1 |
| magnesium chelatase atpase subunit d | RCA23_RS15050 | Not Available | Negative | 3122055 - 3123707 | 58221.6 |
| magnesium chelatase atpase subunit i | RCA23_RS15055 | Not Available | Negative | 3123709 - 3124716 | 36136.2 |
| spheroidene monooxygenase | RCA23_RS15060 | Not Available | Negative | 3124713 - 3125417 | 26648.0 |
| phytoene desaturase family protein | RCA23_RS15065 | Not Available | Positive | 3125532 - 3127076 | 56869.2 |
| 15-cis-phytoene synthase | RCA23_RS15070 | Not Available | Positive | 3127073 - 3128113 | 37859.7 |
| carotenoid 1,2-hydratase | RCA23_RS15075 | Not Available | Negative | 3128114 - 3129022 | 33496.6 |
| 1-hydroxycarotenoid 3,4-desaturase crtd | RCA23_RS15080 | Not Available | Negative | 3129025 - 3130500 | 52762.7 |
| polyprenyl synthetase family protein | RCA23_RS15085 | Not Available | Positive | 3130624 - 3131511 | 31158.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
