Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Planktomarina
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Planktomarina |
| Species | Planktomarina temperata |
| Strain | RCA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Norwegian fjord |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
759356 bp
Thymine Count
765055 bp
Guanine Count
886270 bp
Cytosine Count
877441 bp
Genome Length
3288122 bp
Protein-coding Genes
3150 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter substrate-binding protein | RCA23_RS14985 | Not Available | Negative | 3111240 - 3112520 | 44903.3 |
| globin domain-containing protein | RCA23_RS14990 | Not Available | Positive | 3113045 - 3113410 | 13523.0 |
| na+/h+ antiporter nhaa | RCA23_RS15000 | Not Available | Negative | 3113854 - 3115053 | 41932.5 |
| duf1761 domain-containing protein | RCA23_RS15005 | Not Available | Negative | 3115160 - 3115555 | 13441.7 |
| eve domain-containing protein | RCA23_RS15010 | Not Available | Negative | 3115633 - 3116046 | 15816.7 |
| ycii family protein | RCA23_RS15015 | Not Available | Negative | 3116046 - 3116318 | 10011.1 |
| nad(p)h-dependent glycerol-3-phosphate dehydrogenase | RCA23_RS15020 | Not Available | Negative | 3116318 - 3117283 | 32795.0 |
| uroporphyrinogen-iii synthase | RCA23_RS15025 | Not Available | Positive | 3117395 - 3118087 | 24704.1 |
| hypothetical protein | RCA23_RS15030 | Not Available | Positive | 3118145 - 3119260 | 38979.9 |
| heme biosynthesis protein hemy | RCA23_RS15035 | Not Available | Positive | 3119271 - 3120746 | 53757.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
