Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Planktomarina
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Planktomarina |
| Species | Planktomarina temperata |
| Strain | RCA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Norwegian fjord |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
759356 bp
Thymine Count
765055 bp
Guanine Count
886270 bp
Cytosine Count
877441 bp
Genome Length
3288122 bp
Protein-coding Genes
3150 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| kynureninase | RCA23_RS14830 | Not Available | Positive | 3081251 - 3082447 | 43406.3 |
| gntr family transcriptional regulator | RCA23_RS14835 | Not Available | Positive | 3083041 - 3083694 | 24261.2 |
| glutathione-dependent disulfide-bond oxidoreductase | RCA23_RS14840 | Not Available | Positive | 3083761 - 3084600 | 31101.7 |
| nad-dependent epimerase/dehydratase family protein | RCA23_RS14845 | Not Available | Positive | 3084701 - 3085639 | 33865.1 |
| enoyl-coa hydratase/isomerase family protein | RCA23_RS14850 | Not Available | Positive | 3085650 - 3086444 | 28166.8 |
| 3-hydroxyacyl-coa dehydrogenase nad-binding domain-containing protein | RCA23_RS14855 | Not Available | Negative | 3086463 - 3087386 | 33298.9 |
| sdr family nad(p)-dependent oxidoreductase | RCA23_RS14860 | Not Available | Negative | 3087396 - 3088163 | 25874.4 |
| hypothetical protein | RCA23_RS14865 | Not Available | Positive | 3088328 - 3088942 | 23432.8 |
| site-specific integrase | RCA23_RS14870 | Not Available | Negative | 3088969 - 3089925 | 36283.9 |
| porin | RCA23_RS14875 | Not Available | Positive | 3090049 - 3091107 | 35972.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
