Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Planktomarina
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Planktomarina |
| Species | Planktomarina temperata |
| Strain | RCA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Norwegian fjord |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
759356 bp
Thymine Count
765055 bp
Guanine Count
886270 bp
Cytosine Count
877441 bp
Genome Length
3288122 bp
Protein-coding Genes
3150 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| signal recognition particle protein | RCA23_RS14780 | Not Available | Positive | 3073207 - 3074703 | 52698.0 |
| chorismate mutase | RCA23_RS14785 | Not Available | Positive | 3074735 - 3075031 | 11243.3 |
| 30s ribosomal protein s16 | RCA23_RS14790 | Not Available | Positive | 3075077 - 3075463 | 14104.0 |
| ribosome maturation factor rimm | RCA23_RS14795 | Not Available | Positive | 3075701 - 3076204 | 18001.7 |
| trna (guanosine(37)-n1)-methyltransferase trmd | RCA23_RS14800 | Not Available | Positive | 3076201 - 3076983 | 28450.1 |
| 50s ribosomal protein l19 | RCA23_RS14805 | Not Available | Positive | 3077274 - 3077645 | 13741.5 |
| 50s ribosomal protein l31 | RCA23_RS14810 | Not Available | Positive | 3077657 - 3077878 | 8089.61 |
| division plane positioning atpase mipz | RCA23_RS14815 | Not Available | Positive | 3078055 - 3078864 | 29548.9 |
| carbohydrate kinase family protein | RCA23_RS14820 | Not Available | Negative | 3078861 - 3079793 | 32958.2 |
| 4-hydroxybenzoate 3-monooxygenase | RCA23_RS14825 | Not Available | Positive | 3080009 - 3081187 | 44273.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
