Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Planktomarina
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Planktomarina |
| Species | Planktomarina temperata |
| Strain | RCA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Norwegian fjord |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
759356 bp
Thymine Count
765055 bp
Guanine Count
886270 bp
Cytosine Count
877441 bp
Genome Length
3288122 bp
Protein-coding Genes
3150 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | RCA23_RS16365 | Not Available | Negative | 310035 - 310193 | 5749.98 |
| hypothetical protein | RCA23_RS01420 | Not Available | Negative | 310190 - 310435 | 8754.8 |
| uxaa family hydrolase | RCA23_RS01430 | Not Available | Positive | 310977 - 312479 | 53397.4 |
| gfo/idh/moca family protein | RCA23_RS01435 | Not Available | Positive | 312476 - 313480 | 35945.3 |
| nad(p)-dependent oxidoreductase | RCA23_RS01440 | Not Available | Positive | 313516 - 314403 | 30618.9 |
| dmt family transporter | RCA23_RS01445 | Not Available | Positive | 314406 - 315287 | 32492.9 |
| sugar kinase | RCA23_RS01450 | Not Available | Positive | 315284 - 316147 | 31421.5 |
| mannitol dehydrogenase family protein | RCA23_RS01455 | Not Available | Negative | 316134 - 317333 | 43975.8 |
| glucuronate isomerase | RCA23_RS01460 | Not Available | Negative | 317334 - 318698 | 50717.3 |
| gfo/idh/moca family protein | RCA23_RS01465 | Not Available | Positive | 318798 - 319817 | 35965.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
