Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Planktomarina
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Planktomarina |
| Species | Planktomarina temperata |
| Strain | RCA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Norwegian fjord |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
759356 bp
Thymine Count
765055 bp
Guanine Count
886270 bp
Cytosine Count
877441 bp
Genome Length
3288122 bp
Protein-coding Genes
3150 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 5-aminolevulinate synthase | RCA23_RS00105 | Not Available | Positive | 21845 - 23056 | 43685.2 |
| c-type cytochrome | RCA23_RS00110 | Not Available | Positive | 23097 - 23540 | 15681.6 |
| acetyl-coa c-acyltransferase family protein | RCA23_RS00115 | Not Available | Negative | 23602 - 24777 | 40150.6 |
| error-prone dna polymerase | RCA23_RS00120 | Not Available | Positive | 24942 - 27992 | 112724.0 |
| transcription termination/antitermination protein nusg | RCA23_RS00125 | Not Available | Positive | 28122 - 28625 | 19278.5 |
| lytic murein transglycosylase | RCA23_RS00130 | Not Available | Negative | 28636 - 29748 | 40293.8 |
| ribonuclease r | RCA23_RS00135 | Not Available | Negative | 29745 - 31991 | 81853.0 |
| copper chaperone pcu(a)c | RCA23_RS00140 | Not Available | Positive | 32084 - 32503 | 15030.2 |
| chorismate synthase | RCA23_RS00145 | Not Available | Negative | 32512 - 33615 | 39165.8 |
| hypothetical protein | RCA23_RS00150 | Not Available | Positive | 34180 - 34422 | 8755.66 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
