Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Planktomarina
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Planktomarina |
| Species | Planktomarina temperata |
| Strain | RCA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Norwegian fjord |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
759356 bp
Thymine Count
765055 bp
Guanine Count
886270 bp
Cytosine Count
877441 bp
Genome Length
3288122 bp
Protein-coding Genes
3150 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpha/beta fold hydrolase | RCA23_RS14730 | Not Available | Positive | 3060348 - 3061232 | 32185.2 |
| 30s ribosomal protein s15 | RCA23_RS14735 | Not Available | Positive | 3061378 - 3061647 | 10281.6 |
| dmt family transporter | RCA23_RS14740 | Not Available | Positive | 3061763 - 3062671 | 32461.8 |
| polyribonucleotide nucleotidyltransferase | RCA23_RS14745 | Not Available | Positive | 3062837 - 3064972 | 76680.7 |
| aldehyde dehydrogenase family protein | RCA23_RS14750 | Not Available | Positive | 3065297 - 3066739 | 51384.1 |
| rlua family pseudouridine synthase | RCA23_RS14755 | Not Available | Negative | 3066870 - 3067514 | 24159.5 |
| yjbh domain-containing protein | RCA23_RS16810 | Not Available | Positive | 3067641 - 3069767 | 76887.8 |
| yjbf family lipoprotein | RCA23_RS16120 | Not Available | Positive | 3069770 - 3070432 | 23946.9 |
| udp-glucose 4-epimerase gale | RCA23_RS14770 | Not Available | Positive | 3070451 - 3071461 | 36187.9 |
| fad-linked oxidase c-terminal domain-containing protein | RCA23_RS14775 | Not Available | Negative | 3071458 - 3072885 | 50284.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
