Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Planktomarina
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Planktomarina |
| Species | Planktomarina temperata |
| Strain | RCA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Norwegian fjord |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
759356 bp
Thymine Count
765055 bp
Guanine Count
886270 bp
Cytosine Count
877441 bp
Genome Length
3288122 bp
Protein-coding Genes
3150 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| etc complex i subunit | RCA23_RS14480 | Not Available | Negative | 3007812 - 3008123 | 11656.7 |
| 5s ribosomal rna | Not Available | Not Available | Positive | 3008248 - 3008362 | Not Available |
| 23s ribosomal rna | Not Available | Not Available | Positive | 3008481 - 3011394 | Not Available |
| Trna-ala | Not Available | Not Available | Positive | 3011835 - 3011910 | Not Available |
| Trna-ile | Not Available | Not Available | Positive | 3011931 - 3012007 | Not Available |
| 16s ribosomal rna | Not Available | Not Available | Positive | 3012255 - 3013719 | Not Available |
| sulfite oxidase heme-binding subunit yedz | RCA23_RS14510 | Not Available | Negative | 3014311 - 3014946 | 23830.3 |
| protein-methionine-sulfoxide reductase catalytic subunit msrp | RCA23_RS14515 | Not Available | Negative | 3015032 - 3015934 | 33809.0 |
| sdr family nad(p)-dependent oxidoreductase | RCA23_RS14520 | Not Available | Positive | 3016084 - 3016839 | 26406.4 |
| had family hydrolase | RCA23_RS14525 | Not Available | Negative | 3016816 - 3017484 | 23489.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
