Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Planktomarina
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Planktomarina |
| Species | Planktomarina temperata |
| Strain | RCA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Norwegian fjord |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
759356 bp
Thymine Count
765055 bp
Guanine Count
886270 bp
Cytosine Count
877441 bp
Genome Length
3288122 bp
Protein-coding Genes
3150 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| substrate-binding domain-containing protein | RCA23_RS14430 | Not Available | Negative | 2994823 - 2995125 | 10787.2 |
| sulfite exporter taue/safe family protein | RCA23_RS14435 | Not Available | Negative | 2995341 - 2996093 | 26629.0 |
| pyridoxal-phosphate-dependent aminotransferase family protein | RCA23_RS14440 | Not Available | Negative | 2996074 - 2997171 | 39278.9 |
| fad-binding and (fe-s)-binding domain-containing protein | RCA23_RS14445 | Not Available | Positive | 2997311 - 3000124 | 102437.0 |
| sulfite exporter taue/safe family protein | RCA23_RS14450 | Not Available | Positive | 3000108 - 3000872 | 27291.8 |
| class i adenylate-forming enzyme family protein | RCA23_RS14455 | Not Available | Negative | 3000869 - 3002359 | 53837.2 |
| acylating sulfoacetaldehyde dehydrogenase | RCA23_RS14460 | Not Available | Negative | 3002356 - 3003741 | 48911.1 |
| tripartite tricarboxylate transporter permease | RCA23_RS14465 | Not Available | Negative | 3003773 - 3005263 | 52163.5 |
| tripartite tricarboxylate transporter tctb family protein | RCA23_RS14470 | Not Available | Negative | 3005270 - 3005815 | 20529.6 |
| tripartite tricarboxylate transporter substrate binding protein | RCA23_RS14475 | Not Available | Negative | 3005886 - 3006899 | 36770.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
