Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Planktomarina
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Planktomarina |
| Species | Planktomarina temperata |
| Strain | RCA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 25 |
| Temperature range | mesophilic |
| Habitat | Norwegian fjord |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
759356 bp
Thymine Count
765055 bp
Guanine Count
886270 bp
Cytosine Count
877441 bp
Genome Length
3288122 bp
Protein-coding Genes
3150 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acetyl/propionyl/methylcrotonyl-coa carboxylase subunit alpha | RCA23_RS14380 | Not Available | Negative | 2982182 - 2984179 | 72398.0 |
| hypothetical protein | RCA23_RS14385 | Not Available | Negative | 2984429 - 2984788 | 13753.2 |
| acyl-coa carboxylase subunit beta | RCA23_RS14390 | Not Available | Negative | 2984807 - 2986339 | 55876.9 |
| multidrug effflux mfs transporter | RCA23_RS14395 | Not Available | Positive | 2986491 - 2987720 | 42723.9 |
| short-chain fatty acyl-coa regulator family protein | RCA23_RS14400 | Not Available | Positive | 2987752 - 2989146 | 51458.3 |
| betaine-aldehyde dehydrogenase | RCA23_RS14405 | Not Available | Negative | 2989175 - 2990629 | 51336.3 |
| dmt family transporter | RCA23_RS14410 | Not Available | Negative | 2990626 - 2991519 | 31927.5 |
| trap transporter large permease | RCA23_RS14415 | Not Available | Negative | 2991571 - 2992971 | 49363.2 |
| trap transporter small permease subunit | RCA23_RS14420 | Not Available | Negative | 2992971 - 2993600 | 23256.9 |
| c4-dicarboxylate trap transporter substrate-binding protein | RCA23_RS14425 | Not Available | Negative | 2993682 - 2994698 | 36703.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
